| Date | Res | Opp | OW-OL | ||
| 11/18/2008 | L 79-86 | @ | Northern Illinois | 8-20 | |
| 11/23/2008 | L 69-80 | North Texas | 18-12 | ||
| 11/26/2008 | L 61-67 | Murray St | 16-12 | ||
| 11/29/2008 | L 70-75 | @ | DePaul | 8-24 | |
| 12/1/2008 | L 54-56 | Arkansas St | 10-17 | ||
| 12/6/2008 | L 43-83 | @ | Louisville | 29-5 | |
| 12/7/2008 | W 68-66 | vs | Lamar | 11-14 | |
| 12/8/2008 | L 50-62 | vs | Ohio | 14-17 | |
| 12/13/2008 | L 62-76 | @ | Purdue | 26-10 | |
| 12/23/2008 | L 41-62 | @ | IUPUI | 12-14 | |
| 12/28/2008 | W 85-84 2 OT | @ | Northern Iowa | 20-10 | |
| 12/31/2008 | L 61-79 | Creighton | 25-8 | ||
| 1/4/2009 | L 59-65 | Evansville | 13-14 | ||
| 1/7/2009 | L 50-69 | @ | Drake | 15-14 | |
| 1/10/2009 | W 75-70 OT | Illinois St | 24-8 | ||
| 1/13/2009 | L 52-63 | Bradley | 18-14 | ||
| 1/17/2009 | L 57-63 | @ | Evansville | 13-14 | |
| 1/21/2009 | L 47-58 | Southern Illinois | 11-17 | ||
| 1/24/2009 | L 56-68 | @ | Bradley | 18-14 | |
| 1/27/2009 | L 62-73 | @ | Creighton | 25-8 | |
| 1/31/2009 | L 57-61 | Northern Iowa | 20-10 | ||
| 2/4/2009 | L 58-64 | Wichita St | 14-17 | ||
| 2/8/2009 | W 75-73 OT | @ | Illinois St | 24-8 | |
| 2/11/2009 | W 69-57 | Drake | 15-14 | ||
| 2/14/2009 | W 76-71 | @ | Missouri St | 11-18 | |
| 2/18/2009 | W 78-72 | @ | Southern Illinois | 11-17 | |
| 2/21/2009 | W 69-62 | Toledo | 6-24 | ||
| 2/24/2009 | L 70-76 | @ | Wichita St | 14-17 | |
| 2/28/2009 | W 69-52 | Missouri St | 11-18 | ||
| 3/5/2009 | W 62-55 | vs | Drake | 15-14 | Missouri Valley |
| 3/6/2009 | L 69-73 | vs | Northern Iowa | 20-10 | Missouri Valley |
| 10-21 | 309-289 |