| Date | Res | Opp | OW-OL | ||
| 11/15/2008 | W 65-60 | San Diego | 14-15 | ||
| 11/18/2008 | W 73-48 | UT Pan American | 6-16 | ||
| 11/20/2008 | W 87-71 | Northern Arizona | 6-18 | ||
| 11/22/2008 | W 71-58 | North Carolina A&T | 13-15 | ||
| 11/24/2008 | W 80-67 | @ | UTEP | 22-11 | |
| 11/28/2008 | L 55-73 | California | 21-11 | ||
| 11/29/2008 | L 65-67 | Cincinnati | 16-14 | ||
| 12/3/2008 | W 82-76 | @ | Fresno St | 12-20 | |
| 12/6/2008 | W 64-57 | @ | Nevada | 20-12 | |
| 12/14/2008 | W 70-61 | Western Michigan | 10-19 | ||
| 12/17/2008 | W 78-66 | Santa Clara | 14-16 | ||
| 12/20/2008 | W 79-64 | Arizona | 21-12 | ||
| 12/23/2008 | W 73-60 | Southern Utah | 10-18 | ||
| 12/31/2008 | W 56-55 | @ | Louisville | 30-4 | |
| 1/3/2009 | W 60-58 | New Mexico | 21-11 | ||
| 1/10/2009 | L 73-80 | @ | TCU | 12-16 | |
| 1/14/2009 | L 69-71 | @ | Colorado St | 8-20 | |
| 1/17/2009 | W 83-66 | Wyoming | 16-13 | ||
| 1/21/2009 | W 75-70 | @ | BYU | 24-6 | |
| 1/24/2009 | W 75-65 | Utah | 23-8 | ||
| 1/31/2009 | W 59-38 | @ | Air Force | 8-19 | |
| 2/3/2009 | L 66-68 OT | San Diego St | 21-9 | ||
| 2/7/2009 | L 69-73 OT | @ | New Mexico | 21-11 | |
| 2/10/2009 | W 71-57 | TCU | 12-16 | ||
| 2/14/2009 | W 89-70 | Colorado St | 8-20 | ||
| 2/18/2009 | L 68-77 | @ | Wyoming | 16-13 | |
| 2/21/2009 | W 75-74 | BYU | 24-6 | ||
| 2/25/2009 | L 60-70 | @ | Utah | 23-8 | |
| 3/4/2009 | W 46-43 | Air Force | 8-19 | ||
| 3/7/2009 | L 46-57 | @ | San Diego St | 21-9 | |
| 3/12/2009 | L 57-71 | San Diego St | 21-9 | Mountain West | |
| 3/17/2009 | L 60-70 | @ | Kentucky | 21-14 | NIT1 |
| 21-11 | 369-317 |